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STRINGSTRING
Neut_1762 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1762" - PFAM: sugar transferase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1762PFAM- sugar transferase; KEGG- neu-NE0378 bacterial sugar transferase (423 aa)    
Predicted Functional Partners:
Neut_1763
Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE0377 sensory transduction histidine kinase (693 aa)
 
          0.907
Neut_0893
Putative capsular polysaccharide biosynthetic protein-like protein; KEGG- neu-NE1803 possible similar to capsular polysaccharide biosynthesis (310 aa)
 
   
  0.797
Neut_0891
PFAM- polysaccharide export protein; KEGG- neu-NE1805 putative polysaccharide export protein, outer membrane (205 aa)
 
   
  0.785
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG- neu-NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM- mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM- mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein (483 aa)
   
   
  0.771
Neut_0892
PFAM- lipopolysaccharide biosynthesis; KEGG- neu-NE1804 chain length determinant protein (514 aa)
 
   
  0.718
Neut_0896
PFAM- polysaccharide deacetylase; KEGG- neu-NE1800 polysaccharide deacetylase (279 aa)
 
     
  0.690
Neut_0898
PFAM- glycosyl transferase, group 1; KEGG- neu-NE1798 glycosyl transferase group 1 (403 aa)
 
   
  0.676
Neut_0899
TIGRFAM- eight transmembrane protein EpsH; KEGG- neu-NE1797 hypothetical protein (522 aa)
 
          0.675
Neut_0897
KEGG- neu-NE1799 hypothetical protein (359 aa)
 
          0.645
Neut_2120
PFAM- lipopolysaccharide biosynthesis; KEGG- neu-NE2280 chain length determinant protein (747 aa)
 
   
  0.644
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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