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Neut_1779 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1779" - KEGG: neu:NE2325 possible transmembrane protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1779KEGG- neu-NE2325 possible transmembrane protein (127 aa)    
Predicted Functional Partners:
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (245 aa)
   
        0.891
Neut_1780
Signal peptidase I; KEGG- neu-NE2326 bacterial leader peptidase 1 (S26A) family-Signal peptidase; TIGRFAM- signal peptidase I; PFAM- peptidase S24, S26A and S26B; Belongs to the peptidase S26 family (267 aa)
   
        0.884
Neut_2385
PFAM- CheW domain protein; KEGG- neu-NE1006 CheW-like domain (159 aa)
   
        0.768
Neut_1805
PFAM- Pilus assembly protein, PilO; KEGG- neu-NE2314 putative fimbrial type-4 assembly membrane transmembrane protein (216 aa)
 
   
  0.751
Neut_1806
PFAM- Fimbrial assembly family protein; KEGG- neu-NE2315 putative type 4 fimbrial biogenesis protein PilN (203 aa)
 
   
  0.735
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (296 aa)
              0.730
Neut_1149
KEGG- neu-NE0690 possible transmembrane protein (798 aa)
   
          0.729
Neut_1162
CheA signal transduction histidine kinases; PFAM- response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG- neu-NE1250 two-component hybrid sensor and regulator (1716 aa)
   
   
  0.716
Neut_2170
KEGG- neu-NE0146 TPR repeat; TIGRFAM- type IV pilus biogenesis/stability protein PilW; PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein (263 aa)
   
     
  0.710
Neut_0393
PFAM- Peptidoglycan-binding LysM; KEGG- neu-NE1969 LysM motif (342 aa)
   
     
  0.702
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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