STRINGSTRING
Neut_1779 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1779" - Putative transmembrane protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1779Putative transmembrane protein (127 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (245 aa)
              0.885
Neut_1780
Signal peptidase I (267 aa)
              0.802
Neut_1805
Pilus assembly protein, PilO (216 aa)
 
          0.790
Neut_1806
Fimbrial assembly family protein (203 aa)
 
          0.779
Neut_1804
Pilus assembly protein, PilQ (175 aa)
 
          0.778
Neut_1807
Type IV pilus assembly protein PilM (374 aa)
 
          0.775
Neut_2385
CheW protein (159 aa)
   
          0.775
Neut_1149
Putative transmembrane protein (798 aa)
   
          0.765
Neut_0393
Peptidoglycan-binding LysM (342 aa)
   
          0.763
Neut_2170
Type IV pilus biogenesis/stability protein PilW (263 aa)
   
          0.756
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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