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STRINGSTRING
Neut_1782 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1782" - PFAM: glutaredoxin 2 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1782PFAM- glutaredoxin 2; KEGG- neu-NE2328 putative thioredoxin (85 aa)    
Predicted Functional Partners:
Neut_1783
Periplasmic serine endoprotease DegP-like; TIGRFAM- protease Do; PFAM- peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG- neu-NE2329 serine protease MucD precursor; Belongs to the peptidase S1C family (490 aa)
              0.888
Neut_2438
PFAM- FlgN family protein; KEGG- neu-NE2477 putative flagella synthesis protein FlgN (154 aa)
   
          0.655
Neut_2367
KEGG- neu-NE2466 putative lipoprotein (193 aa)
   
          0.637
Neut_1408
PFAM- protein of unknown function DUF490; KEGG- neu-NE0929 putative signal peptide protein (1299 aa)
   
          0.636
Neut_1785
RNA polymerase sigma factor; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2331 sigma factor, ECF subfamily (200 aa)
              0.635
Neut_1784
KEGG- neu-NE2330 sigma-E factor negative regulatory protein RseA (191 aa)
              0.623
Neut_0855
PFAM- Sulfate transporter/antisigma-factor antagonist STAS; KEGG- neu-NE2380 STAS domain (104 aa)
   
          0.601
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (598 aa)
              0.592
Neut_1288
Putative transcriptional regulator, XRE family protein; KEGG- neu-NE1519 hypothetical protein (95 aa)
   
          0.590
dsbD
Thiol-disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps (647 aa)
 
 
  0.589
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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