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Neut_1784 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1784" - sigma-E factor negative regulatory protein RseA in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1784sigma-E factor negative regulatory protein RseA (191 aa)    
Predicted Functional Partners:
Neut_1785
RNA polymerase sigma factor RpoE (200 aa)
              0.824
Neut_2279
Hypothetical protein (240 aa)
   
          0.685
Neut_0423
Hypothetical protein (418 aa)
   
          0.652
Neut_2051
Putative sulfonate binding protein precursor (358 aa)
   
          0.648
Neut_0774
Putative transmembrane protein (263 aa)
   
          0.628
Neut_0509
Hypothetical protein (281 aa)
   
          0.609
Neut_0765
Hypothetical protein (255 aa)
   
          0.571
Neut_1681
Hypothetical protein (461 aa)
   
          0.556
Neut_1917
Hypothetical protein (196 aa)
   
          0.530
Neut_2522
Porin (413 aa)
   
          0.528
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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