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Neut_1784 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1784" - KEGG: neu:NE2330 sigma-E factor negative regulatory protein RseA in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1784KEGG- neu-NE2330 sigma-E factor negative regulatory protein RseA (191 aa)    
Predicted Functional Partners:
Neut_1785
RNA polymerase sigma factor; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2331 sigma factor, ECF subfamily (200 aa)
   
 
  0.953
Neut_1783
Periplasmic serine endoprotease DegP-like; TIGRFAM- protease Do; PFAM- peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG- neu-NE2329 serine protease MucD precursor; Belongs to the peptidase S1C family (490 aa)
   
 
  0.798
Neut_2028
Zinc metalloprotease; TIGRFAM- putative membrane-associated zinc metalloprotease; PFAM- PDZ/DHR/GLGF domain protein; peptidase M50; KEGG- neu-NE1711 membrane-associated Zn-dependent proteases 1 (455 aa)
     
 
  0.707
Neut_2279
KEGG- neu-NE0086 hypothetical protein (240 aa)
   
          0.698
Neut_0774
KEGG- neu-NE1472 possible transmembrane protein (263 aa)
   
          0.653
Neut_2090
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2138 sigma factor, ECF subfamily (169 aa)
   
 
  0.650
Neut_1395
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE0917 RNA polymerase sigma-70 factor (167 aa)
   
 
  0.650
Neut_1782
PFAM- glutaredoxin 2; KEGG- neu-NE2328 putative thioredoxin (85 aa)
              0.623
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
 
 
  0.616
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
   
          0.605
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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