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Neut_1785 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1785" - RNA polymerase sigma factor in Nitrosomonas eutropha
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Neut_1785RNA polymerase sigma factor; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2331 sigma factor, ECF subfamily (200 aa)    
Predicted Functional Partners:
Neut_1784
KEGG- neu-NE2330 sigma-E factor negative regulatory protein RseA (191 aa)
   
 
  0.953
Neut_1783
Periplasmic serine endoprotease DegP-like; TIGRFAM- protease Do; PFAM- peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG- neu-NE2329 serine protease MucD precursor; Belongs to the peptidase S1C family (490 aa)
   
   
  0.693
Neut_0343
Flagellar rod assembly protein/muramidase FlgJ; KEGG- neu-NE0310 mannosyl-glycoprotein endo-beta-N-acetylglucosamidases; TIGRFAM- flagellar rod assembly protein/muramidase FlgJ; PFAM- Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART- Lysozyme subfamily 2 (335 aa)
       
      0.679
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
         
  0.657
Neut_1782
PFAM- glutaredoxin 2; KEGG- neu-NE2328 putative thioredoxin (85 aa)
              0.635
rpoH
TIGRFAM- RNA polymerase sigma factor RpoH; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG- neu-NE0584 sigma-70 factor family (280 aa)
     
 
  0.592
Neut_0219
Histidine kinase; KEGG- neu-NE0049 sensory transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART- PAS domain containing protein (1221 aa)
     
 
  0.584
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
   
 
  0.581
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (749 aa)
     
 
  0.570
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1404 aa)
   
 
  0.557
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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