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ybeY protein (Nitrosomonas eutropha) - STRING interaction network
"ybeY" - Hypothetical protein in Nitrosomonas eutropha
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ybeYHypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (141 aa)    
Predicted Functional Partners:
Neut_1788
PhoH family protein (336 aa)
   
 
  0.928
Neut_1786
Hypothetical protein (283 aa)
   
   
  0.878
miaB
(dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (443 aa)
 
     
  0.765
lnt
Apolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (497 aa)
   
   
  0.686
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (734 aa)
         
  0.613
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (749 aa)
 
        0.540
rpoH
RNA polymerase factor sigma-32 (280 aa)
 
        0.531
Neut_2308
5-formyltetrahydrofolate cyclo-ligase (212 aa)
     
      0.529
Neut_0380
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (374 aa)
 
          0.529
glyS
glycine--tRNA ligase (715 aa)
 
        0.519
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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