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STRINGSTRING
Neut_1804 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1804" - PFAM: Pilus assembly protein, PilQ in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1804PFAM- Pilus assembly protein, PilQ; KEGG- neu-NE2313 putative type 4 fimbrial biogenesis protein PilP (175 aa)    
Predicted Functional Partners:
Neut_1803
TIGRFAM- type IV pilus secretin PilQ; PFAM- type II and III secretion system protein; Secretin/TonB, short N-terminal domain; KEGG- neu-NE2312 probable fimbrial type-4 assembly signal peptide protein; Belongs to the GSP D family (720 aa)
 
 
  0.996
Neut_1805
PFAM- Pilus assembly protein, PilO; KEGG- neu-NE2314 putative fimbrial type-4 assembly membrane transmembrane protein (216 aa)
 
  0.996
Neut_1806
PFAM- Fimbrial assembly family protein; KEGG- neu-NE2315 putative type 4 fimbrial biogenesis protein PilN (203 aa)
 
 
  0.995
Neut_1807
TIGRFAM- type IV pilus assembly protein PilM; KEGG- neu-NE2316 putative type 4 fimbrial biogenesis protein PilM (374 aa)
 
 
  0.989
Neut_0393
PFAM- Peptidoglycan-binding LysM; KEGG- neu-NE1969 LysM motif (342 aa)
   
      0.880
Neut_1162
CheA signal transduction histidine kinases; PFAM- response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG- neu-NE1250 two-component hybrid sensor and regulator (1716 aa)
   
        0.861
Neut_2385
PFAM- CheW domain protein; KEGG- neu-NE1006 CheW-like domain (159 aa)
   
        0.782
Neut_0513
PFAM- type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG- neu-NE1604 general (type II) secretion pathway (GSP) D protein (767 aa)
   
 
  0.765
Neut_2170
KEGG- neu-NE0146 TPR repeat; TIGRFAM- type IV pilus biogenesis/stability protein PilW; PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein (263 aa)
   
     
  0.746
Neut_1833
KEGG- neu-NE1747 putative type 4 fimbrial biogenesis protein PilY1 (1143 aa)
   
        0.742
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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