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Neut_1809 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1809" - Histone deacetylase superfamily protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1809Histone deacetylase superfamily protein (306 aa)    
Predicted Functional Partners:
Neut_2181
SNF2-related protein (897 aa)
   
  0.926
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity (640 aa)
     
  0.904
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1190 aa)
   
  0.827
Neut_1571
D-isomer specific 2-hydroxyacid dehydrogenase (405 aa)
     
    0.729
Neut_0433
D-isomer specific 2-hydroxyacid dehydrogenase (311 aa)
     
    0.729
Neut_1284
Ankyrin (218 aa)
   
    0.696
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (880 aa)
   
      0.675
Neut_2487
Ankyrin (324 aa)
     
    0.654
Neut_0115
DNA-cytosine methyltransferase (497 aa)
     
  0.573
Neut_1810
Prevent-host-death protein (73 aa)
              0.546
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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