STRINGSTRING
rpiA protein (Nitrosomonas eutropha) - STRING interaction network
"rpiA" - Ribose-5-phosphate isomerase A in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (241 aa)    
Predicted Functional Partners:
Neut_1577
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (672 aa)
   
  0.957
Neut_2096
Ribulose-phosphate 3-epimerase (226 aa)
   
  0.950
Neut_2144
6-phosphogluconate dehydrogenase (302 aa)
 
   
  0.924
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (316 aa)
   
  0.923
Neut_0772
Phosphoribulokinase (290 aa)
         
  0.912
Neut_2432
6-phosphogluconate dehydrogenase (351 aa)
       
  0.909
Neut_2007
Phosphomannomutase (459 aa)
   
 
  0.906
Neut_2184
Phosphoglucomutase (523 aa)
   
 
    0.905
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
   
 
  0.888
Neut_2392
Cytochrome c oxidase subunit III (281 aa)
           
  0.813
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (9%) [HD]