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Neut_1836 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1836" - TIGRFAM: Prepilin-type cleavage/methylation-like in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1836TIGRFAM- Prepilin-type cleavage/methylation-like; type IV pilus modification protein PilV; KEGG- neu-NE1750 putative pre-pilin leader sequence (164 aa)    
Predicted Functional Partners:
Neut_1835
TIGRFAM- Prepilin-type cleavage/methylation-like; KEGG- neu-NE1749 type IV pilus assembly protein PilW (354 aa)
 
   
  0.984
Neut_1837
KEGG- neu-NE1751 putative type-4 fimbrial pilin related signal peptide protein (185 aa)
 
   
  0.983
Neut_1834
KEGG- neu-NE1748 type IV pilus assembly protein PilX (283 aa)
 
   
  0.971
Neut_1833
KEGG- neu-NE1747 putative type 4 fimbrial biogenesis protein PilY1 (1143 aa)
 
   
  0.958
Neut_1832
KEGG- neu-NE1746 fimbrial protein pilin (149 aa)
 
   
  0.914
Neut_1806
PFAM- Fimbrial assembly family protein; KEGG- neu-NE2315 putative type 4 fimbrial biogenesis protein PilN (203 aa)
 
     
  0.781
Neut_1804
PFAM- Pilus assembly protein, PilQ; KEGG- neu-NE2313 putative type 4 fimbrial biogenesis protein PilP (175 aa)
   
          0.701
Neut_1805
PFAM- Pilus assembly protein, PilO; KEGG- neu-NE2314 putative fimbrial type-4 assembly membrane transmembrane protein (216 aa)
 
     
  0.691
Neut_0393
PFAM- Peptidoglycan-binding LysM; KEGG- neu-NE1969 LysM motif (342 aa)
   
          0.661
Neut_1807
TIGRFAM- type IV pilus assembly protein PilM; KEGG- neu-NE2316 putative type 4 fimbrial biogenesis protein PilM (374 aa)
 
     
  0.656
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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