• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1838 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1838" - KEGG: nmu:Nmul_A2046 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1838KEGG- nmu-Nmul_A2046 hypothetical protein (73 aa)    
Predicted Functional Partners:
Neut_1837
KEGG- neu-NE1751 putative type-4 fimbrial pilin related signal peptide protein (185 aa)
              0.548
Neut_1836
TIGRFAM- Prepilin-type cleavage/methylation-like; type IV pilus modification protein PilV; KEGG- neu-NE1750 putative pre-pilin leader sequence (164 aa)
              0.548
Neut_1835
TIGRFAM- Prepilin-type cleavage/methylation-like; KEGG- neu-NE1749 type IV pilus assembly protein PilW (354 aa)
              0.526
Neut_0633
KEGG- tbd-Tbd_2422 hypothetical protein (87 aa)
 
          0.507
Neut_1834
KEGG- neu-NE1748 type IV pilus assembly protein PilX (283 aa)
              0.484
Neut_1833
KEGG- neu-NE1747 putative type 4 fimbrial biogenesis protein PilY1 (1143 aa)
              0.480
Neut_1174
PFAM- protein of unknown function DUF1123; KEGG- ret-RHE_CH00798 hypothetical protein (136 aa)
   
          0.438
Neut_1832
KEGG- neu-NE1746 fimbrial protein pilin (149 aa)
              0.433
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]