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Neut_1853 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1853" - KEGG: bja:bll0020 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1853KEGG- bja-bll0020 hypothetical protein (432 aa)    
Predicted Functional Partners:
Neut_1854
Uncharacterized protein; KEGG- sde-Sde_1587 pseudouridine synthase, RluD (492 aa)
              0.821
Neut_1852
KEGG- ani-AN6320.2 hypothetical protein (181 aa)
              0.761
Neut_1041
PFAM- ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG- neu-NE0594 CDP-6-deoxy-delta-3,4-glucoseen reductase (348 aa)
   
 
  0.720
Neut_1856
annotation not available (182 aa)
              0.635
Neut_1855
PFAM- Integrase, catalytic region; KEGG- nwi-Nwi_2917 integrase, catalytic region (306 aa)
              0.635
Neut_1507
Squalene-hopene cyclase; KEGG- neu-NE1168 prenyltransferase and squalene oxidase repeats; TIGRFAM- squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (670 aa)
   
 
  0.599
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
     
   
  0.536
Neut_0403
Farnesyl-diphosphate farnesyltransferase; PFAM- Squalene/phytoene synthase; KEGG- neu-NE1958 squalene and phytoene synthase (346 aa)
   
 
  0.530
Neut_1689
TIGRFAM- Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM- monooxygenase, FAD-binding; KEGG- neu-NE1512 hypothetical protein (388 aa)
     
 
  0.506
Neut_1207
TIGRFAM- Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM- monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG- neu-NE0873 aromatic-ring hydroxylase (flavoprotein monooxygenase) (391 aa)
     
 
  0.506
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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