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STRINGSTRING
Neut_1858 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1858" - PFAM: Ferritin, Dps family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1858PFAM- Ferritin, Dps family protein; KEGG- nmu-Nmul_A2388 ferritin and Dps (153 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (365 aa)
         
  0.902
Neut_1195
Bacterioferritin; Iron-storage protein (154 aa)
         
  0.823
Neut_0812
Bacterioferritin; PFAM- Ferritin, Dps family protein; KEGG- tbd-Tbd_2643 bacterioferritin; Belongs to the bacterioferritin family (140 aa)
         
  0.823
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
   
 
  0.728
Neut_1857
KEGG- mca-MCA1000 hypothetical protein (276 aa)
 
          0.639
Neut_1851
KEGG- ana-all1573 unknown protein (189 aa)
 
          0.538
Neut_2000
KEGG- noc-Noc_1099 hypothetical protein (93 aa)
   
          0.497
Neut_1859
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1050 aa)
              0.479
rsgA
Small ribosomal subunit biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit (309 aa)
       
      0.443
Neut_0534
PFAM- lipolytic enzyme, G-D-S-L family; KEGG- nmu-Nmul_A1186 lipolytic enzyme, G-D-S-L (335 aa)
   
          0.441
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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