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STRINGSTRING
Neut_1932 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1932" - PFAM: TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1932PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE0617 TonB-dependent receptor protein (728 aa)    
Predicted Functional Partners:
Neut_1935
PFAM- protein of unknown function DUF214; KEGG- tbd-Tbd_1360 ABC transporter permease protein (399 aa)
 
        0.614
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
   
 
  0.613
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.613
Neut_1933
PFAM- regulatory protein, TetR; KEGG- eba-ebA6247 transcriptional regulator, TetR family (202 aa)
 
          0.609
Neut_1936
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tbd-Tbd_1359 ABC transporter ATPase (267 aa)
 
          0.605
Neut_1934
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- tbd-Tbd_1361 RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
 
          0.598
Neut_0374
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE2124 TonB-dependent receptor protein (736 aa)
 
 
  0.534
Neut_0103
KEGG- bxe-Bxe_A1200 hypothetical protein (193 aa)
       
      0.438
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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