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Neut_1935 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1935" - PFAM: protein of unknown function DUF214 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1935PFAM- protein of unknown function DUF214; KEGG- tbd-Tbd_1360 ABC transporter permease protein (399 aa)    
Predicted Functional Partners:
Neut_1934
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- tbd-Tbd_1361 RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
 
      0.981
Neut_1936
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tbd-Tbd_1359 ABC transporter ATPase (267 aa)
 
      0.979
Neut_1933
PFAM- regulatory protein, TetR; KEGG- eba-ebA6247 transcriptional regulator, TetR family (202 aa)
 
     
  0.966
Neut_1011
PFAM- regulatory protein, TetR; KEGG- eba-ebA6247 transcriptional regulator, TetR family (202 aa)
 
     
  0.795
argA
TIGRFAM- amino-acid N-acetyltransferase; PFAM- GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG- neu-NE0778 GCN5-related N-acetyltransferase-aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily (444 aa)
     
        0.657
Neut_1932
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE0617 TonB-dependent receptor protein (728 aa)
 
        0.614
Neut_0974
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- mca-MCA1809 ABC transporter, ATP-binding protein (229 aa)
   
      0.531
Neut_2158
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- neu-NE0170 outer membrane efflux protein (464 aa)
   
      0.450
Neut_1945
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- sat-SYN_00851 type I secretion outer membrane protein (493 aa)
   
      0.450
Neut_2011
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1899 ATPase component ABC-type (unclassified) transport system (255 aa)
   
      0.430
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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