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Neut_1942 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1942" - Type I site-specific deoxyribonuclease HsdM in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1942Type I site-specific deoxyribonuclease HsdM (116 aa)    
Predicted Functional Partners:
Neut_0540
Restriction modification system DNA specificity subunit (422 aa)
   
 
  0.930
Neut_1943
Mobilization/cell filamentation-like protein (52 aa)
 
          0.876
Neut_0541
N-6 DNA methylase (542 aa)
 
            0.836
Neut_0537
Type I site-specific deoxyribonuclease, HsdR family protein (1072 aa)
   
   
  0.777
Neut_1941
Hypothetical protein (502 aa)
              0.666
Neut_0778
DNA polymerase I (906 aa)
         
  0.626
Neut_2415
Filamentation induced by cAMP protein fic (369 aa)
     
      0.494
Neut_1885
Hypothetical protein (238 aa)
              0.428
Neut_1965
Hypothetical protein (427 aa)
              0.424
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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