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Neut_1947 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1947" - TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1947TIGRFAM- transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM- acriflavin resistance protein; KEGG- noc-Noc_1130 hydrophobe/amphiphile efflux-1 HAE1 (954 aa)    
Predicted Functional Partners:
Neut_1948
KEGG- vpa-VPA0471 putative multidrug efflux membrane fusion protein (86 aa)
          0.996
Neut_1946
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- dde-Dde_0402 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (354 aa)
 
  0.986
Neut_2159
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0169 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (401 aa)
 
  0.922
Neut_1945
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- sat-SYN_00851 type I secretion outer membrane protein (493 aa)
 
  0.910
Neut_2158
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- neu-NE0170 outer membrane efflux protein (464 aa)
 
  0.877
Neut_0987
TIGRFAM- efflux transporter, RND family, MFP subunit; KEGG- neu-NE2037 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (363 aa)
      0.670
Neut_1562
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0346 possible cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (389 aa)
 
 
  0.660
Neut_1766
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0374 putative cation efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (387 aa)
   
 
  0.600
Neut_0975
PFAM- secretion protein HlyD family protein; KEGG- mca-MCA1810 hypothetical protein (319 aa)
   
      0.592
Neut_1561
PFAM- outer membrane efflux protein; KEGG- dar-Daro_1176 outer membrane efflux protein (434 aa)
   
 
  0.571
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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