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STRINGSTRING
Neut_1962 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1962" - TIGRFAM: TonB-dependent siderophore receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1962TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- tbd-Tbd_0715 TonB-dependent siderophore receptor (701 aa)    
Predicted Functional Partners:
Neut_1740
PFAM- PepSY-associated TM helix domain protein; KEGG- bja-blr4505 hypothetical protein (402 aa)
 
   
  0.479
Neut_0942
KEGG- tbd-Tbd_0208 hypothetical protein (743 aa)
   
          0.442
Neut_0720
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1536 TonB-dependent receptor protein (829 aa)
   
     
  0.420
Neut_0719
PFAM- glycosyl hydrolase, BNR repeat-containing protein; KEGG- neu-NE1537 BNR repeat (413 aa)
 
          0.403
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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