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STRINGSTRING
Neut_1966 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1966" - KEGG: neu:NE1883 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1966KEGG- neu-NE1883 hypothetical protein (176 aa)    
Predicted Functional Partners:
Neut_1967
PFAM- ATP dependent DNA ligase; KEGG- neu-NE1884 possible homolog of eukaryotic DNA ligase III (233 aa)
              0.880
Neut_1965
KEGG- neu-NE1882 hypothetical protein (427 aa)
              0.854
Neut_1968
PFAM- protein of unknown function DUF202; KEGG- neu-NE1885 DUF202 (124 aa)
              0.679
queH
Epoxyqueuosine reductase QueH; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) (218 aa)
              0.556
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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