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Neut_1967 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1967" - ATP dependent DNA ligase in Nitrosomonas eutropha
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1967ATP dependent DNA ligase (233 aa)    
Predicted Functional Partners:
Neut_1965
Hypothetical protein (427 aa)
 
          0.973
Neut_1966
Hypothetical protein (176 aa)
              0.870
Neut_1968
Hypothetical protein (124 aa)
              0.692
Neut_1964
Hypothetical protein (218 aa)
              0.593
Neut_0637
Fatty acid desaturase (327 aa)
   
          0.569
vapC
PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) module. An RNase (142 aa)
   
          0.455
Neut_1379
Peptidase M28 (1132 aa)
   
          0.446
Neut_2101
Putative transcriptional regulator (219 aa)
   
          0.440
pcnB
poly(A) polymerase; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (462 aa)
              0.426
cca
Multifunctional tRNA nucleotidyl transferase/2’3’-cyclic phosphodiesterase/2’nucleotidase/phosphatase; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2’- nucleotidase and 2’,3’-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3’-CCA terminus degraded by intracellul [...] (412 aa)
              0.426
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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