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STRINGSTRING
Neut_1999 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1999" - PFAM: protein of unknown function DUF497 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1999PFAM- protein of unknown function DUF497; KEGG- noc-Noc_1098 protein of unknown function DUF497 (113 aa)    
Predicted Functional Partners:
Neut_2000
KEGG- noc-Noc_1099 hypothetical protein (93 aa)
 
          0.963
Neut_1851
KEGG- ana-all1573 unknown protein (189 aa)
   
          0.539
Neut_1480
PFAM- protein of unknown function DUF891; KEGG- eba-ebA3772 hypothetical protein (105 aa)
   
        0.534
Neut_1481
Transcriptional regulator, XRE family protein; SMART- helix-turn-helix domain protein; KEGG- neu-NE1372 helix-turn-helix motif (92 aa)
   
     
  0.507
Neut_2273
KEGG- cya-CYA_2363 hypothetical protein (726 aa)
   
          0.493
Neut_1998
Transcriptional regulator, XRE family protein; PFAM- helix-turn-helix domain protein; KEGG- tde-TDE1647 DNA-binding protein (60 aa)
              0.419
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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