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bamA protein (Nitrosomonas eutropha) - STRING interaction network
"bamA" - Outer membrane protein assembly factor BamA in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
bamAOuter membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (758 aa)    
Predicted Functional Partners:
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (257 aa)
 
 
  0.970
Neut_2028
Zinc metalloprotease; TIGRFAM- putative membrane-associated zinc metalloprotease; PFAM- PDZ/DHR/GLGF domain protein; peptidase M50; KEGG- neu-NE1711 membrane-associated Zn-dependent proteases 1 (455 aa)
 
   
  0.967
Neut_2026
PFAM- outer membrane chaperone Skp (OmpH); KEGG- neu-NE1709 putative transmembrane protein; Belongs to the skp family (187 aa)
 
 
  0.964
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (160 aa)
   
 
 
  0.944
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (409 aa)
   
 
  0.902
Neut_0732
PFAM- NlpBDapX family lipoprotein; KEGG- neu-NE2404 putative transmembrane protein (386 aa)
   
 
  0.879
Neut_2030
PFAM- phosphatidate cytidylyltransferase; KEGG- neu-NE1713 phosphatidate cytidylyltransferase; Belongs to the CDS family (275 aa)
   
        0.860
Neut_0290
PFAM- OmpA/MotB domain protein; KEGG- neu-NE0219 bacterial outer membrane protein; Belongs to the ompA family (173 aa)
   
 
  0.859
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP); Belongs to the DXR family (413 aa)
              0.858
Neut_2492
TIGRFAM- lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM- protein of unknown function DUF214; KEGG- neu-NE1057 DUF214 (415 aa)
 
 
  0.856
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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