STRINGSTRING
Neut_2036 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2036" - Transcriptional regulator, Crp/Fnr family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2036Transcriptional regulator, Crp/Fnr family protein; PFAM- cyclic nucleotide-binding; regulatory protein, Crp; KEGG- neu-NE1719 putative anaerobic transcriptional regulatory protein (242 aa)    
Predicted Functional Partners:
Neut_0181
PFAM- adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_4; SMART- Tetratricopeptide domain protein; KEGG- neu-NE0090 guanylate cyclase-TPR repeat-SAM domain (sterile alpha motif) (1131 aa)
   
 
  0.746
Neut_1130
PFAM- response regulator receiver; KEGG- neu-NE1836 response regulator receiver domain (132 aa)
 
   
 
  0.711
Neut_0318
Kef-type potassium/proton antiporter, CPA2 family; PFAM- TrkA-N domain protein; sodium/hydrogen exchanger; KEGG- noc-Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (568 aa)
         
  0.653
Neut_2037
PFAM- cytochrome c, class I; KEGG- neu-NE1720 cytochrome c, class I (103 aa)
         
  0.654
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (335 aa)
     
      0.590
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (67 aa)
       
      0.583
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1404 aa)
       
 
  0.579
Neut_2433
PFAM- ROK family protein; phosphoglucose isomerase (PGI); KEGG- dra-DR1742 glucose-6-phosphate isomerase; Belongs to the GPI family (768 aa)
   
   
  0.562
Neut_0219
Histidine kinase; KEGG- neu-NE0049 sensory transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART- PAS domain containing protein (1221 aa)
           
  0.557
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (749 aa)
       
 
  0.553
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]