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Neut_2038 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2038" - TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2038TonB-dependent receptor (670 aa)    
Predicted Functional Partners:
Neut_0497
TonB family protein (276 aa)
   
 
  0.778
Neut_1740
PepSY-associated TM helix domain-containing protein (402 aa)
 
        0.680
Neut_1727
PepSY-associated TM helix domain-containing protein (414 aa)
 
        0.624
Neut_0476
Outer membrane efflux protein (474 aa)
   
   
  0.583
Neut_0721
TonB-dependent receptor (709 aa)
   
          0.540
Neut_1252
TonB-dependent siderophore receptor (719 aa)
 
   
  0.538
Neut_2037
Cytochrome c, class I (103 aa)
              0.475
Neut_1891
5,10-methylenetetrahydrofolate reductase (284 aa)
     
      0.474
Neut_1741
TonB-dependent siderophore receptor (709 aa)
   
   
  0.469
Neut_2091
Putative FecR protein (320 aa)
 
        0.464
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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