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STRINGSTRING
Neut_2038 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2038" - PFAM: TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2038PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1721 putative iron complex outermembrane recepter protein (670 aa)    
Predicted Functional Partners:
Neut_1252
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- nmu-Nmul_A1260 TonB-dependent siderophore receptor (719 aa)
   
 
  0.588
Neut_0500
TIGRFAM- methionine synthase; PFAM- dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; KEGG- neu-NE1623 MetH methionine synthase I, cobalamin-binding domain (1237 aa)
         
  0.587
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
   
 
  0.553
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.553
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (701 aa)
           
  0.551
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (329 aa)
     
        0.518
Neut_0139
PFAM- PDZ/DHR/GLGF domain protein; KEGG- neu-NE0018 PDZ domain (also known as DHR or GLGF) (448 aa)
   
   
  0.472
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (733 aa)
     
        0.470
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
   
     
  0.469
Neut_0476
PFAM- outer membrane efflux protein; KEGG- neu-NE1640 outer membrane efflux protein (474 aa)
   
   
  0.452
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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