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STRINGSTRING
Neut_2039 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2039" - PFAM: PHP C-terminal domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2039PFAM- PHP C-terminal domain protein; SMART- phosphoesterase PHP domain protein; KEGG- neu-NE1724 PHP domain N-terminal region-PHP domain C-terminal region (295 aa)    
Predicted Functional Partners:
Neut_2040
TIGRFAM- Sua5/YciO/YrdC/YwlC family protein; PFAM- SUA5/yciO/yrdC, N-terminal domain; KEGG- neu-NE1725 SUA5/YciO/YrdC family-SUA5/YciO/YrdC/YwlC protein family; Belongs to the SUA5 family (210 aa)
        0.804
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (245 aa)
            0.735
Neut_2041
PFAM- peptidase M50; KEGG- neu-NE1726 putative integral membrane transmembrane protein (221 aa)
              0.678
Neut_2044
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (216 aa)
              0.588
Neut_2043
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (281 aa)
              0.588
Neut_2042
KEGG- neu-NE1727 tryptophanyl-tRNA synthetase; TIGRFAM- tryptophanyl-tRNA synthetase; PFAM- aminoacyl-tRNA synthetase, class Ib (400 aa)
              0.588
Neut_0728
TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; PFAM- beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG- neu-NE2408 DNA internalization-related competence protein ComEC/Rec2 (799 aa)
              0.442
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1300 aa)
              0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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