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STRINGSTRING
Neut_2068 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2068" - KEGG: neu:NE1440 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2068KEGG- neu-NE1440 hypothetical protein (141 aa)    
Predicted Functional Partners:
Neut_2070
KEGG- neu-NE1442 hypothetical protein (691 aa)
 
   
  0.964
Neut_2069
KEGG- neu-NE1441 hypothetical protein (81 aa)
 
          0.938
Neut_2071
TIGRFAM- cysteine synthases; cysteine synthase B; PFAM- Pyridoxal-5’-phosphate-dependent enzyme, beta subunit; KEGG- neu-NE1443 pyridoxal-5’-phosphate-dependent enzymes, beta family; Belongs to the cysteine synthase/cystathionine beta- synthase family (292 aa)
              0.782
Neut_1951
PFAM- PfkB domain protein; KEGG- neu-NE0611 PfkB family of carbohydrate kinase (311 aa)
   
          0.586
Neut_2072
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART- Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG- neu-NE1444 TPR repeat (930 aa)
 
          0.549
Neut_1134
KEGG- neu-NE1832 outer membrane lipoprotein (163 aa)
   
          0.450
argD
TIGRFAM- acetylornithine and succinylornithine aminotransferases; PFAM- aminotransferase class-III; KEGG- neu-NE1439 acetylornithine aminotransferase (393 aa)
              0.447
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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