• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_2092 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2092" - PFAM: TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2092PFAM- TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG- neu-NE2140 TonB-dependent receptor protein (765 aa)    
Predicted Functional Partners:
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
 
 
  0.914
Neut_2090
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2138 sigma factor, ECF subfamily (169 aa)
 
   
  0.767
Neut_0374
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE2124 TonB-dependent receptor protein (736 aa)
 
     
  0.629
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
     
  0.545
Neut_1281
PFAM- iron permease FTR1; KEGG- rpd-RPD_3637 iron permease FTR1 (641 aa)
 
        0.495
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
   
 
  0.493
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.493
Neut_1732
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ava-Ava_B0148 TonB-dependent siderophore receptor (670 aa)
   
     
  0.468
Neut_0904
PFAM- protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG- neu-NE1792 hypothetical protein (357 aa)
   
          0.468
Neut_2051
KEGG- neu-NE1735 putative sulfonate binding protein precursor (358 aa)
   
          0.444
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (9%) [HD]