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gph protein (Nitrosomonas eutropha) - STRING interaction network
"gph" - KEGG: neu:NE2149 phosphoglycolate phosphatase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gphKEGG- neu-NE2149 phosphoglycolate phosphatase; TIGRFAM- phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM- Haloacid dehalogenase domain protein hydrolase (240 aa)    
Predicted Functional Partners:
Neut_2096
PFAM- ribulose-phosphate 3-epimerase; KEGG- neu-NE2148 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (226 aa)
 
   
  0.979
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily (473 aa)
       
  0.953
Neut_0805
PFAM- ribulose bisphosphate carboxylase, small chain; KEGG- nha-Nham_4333 ribulose bisphosphate carboxylase, small chain (108 aa)
       
  0.914
Neut_2243
PFAM- D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG- neu-NE0101 glycerate dehydrogenase (322 aa)
     
 
    0.901
Neut_1884
Uncharacterized protein; PFAM- 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG- neu-NE0673 glycolate oxidase (iron-sulfur subunit) protein (420 aa)
       
    0.900
Neut_0446
Uncharacterized protein; PFAM- 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG- neu-NE1670 glycolate oxidase iron-sulfur subunit (426 aa)
       
    0.900
Neut_1883
PFAM- FAD linked oxidase domain protein; KEGG- neu-NE0674 FAD linked oxidase, N-terminal (366 aa)
         
    0.900
Neut_1882
PFAM- FAD linked oxidase domain protein; KEGG- neu-NE0675 glycolate oxidase subunit GlcD (484 aa)
         
    0.900
trpE
Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] (495 aa)
 
   
  0.805
Neut_2095
Aminopeptidase P, Metallo peptidase, MEROPS family M24B; PFAM- peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG- neu-NE2147 metallopeptidase family M24; Belongs to the peptidase M24B family (460 aa)
              0.566
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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