• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_2105 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2105" - PFAM: Tetratricopeptide TPR_2 repeat protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2105PFAM- Tetratricopeptide TPR_2 repeat protein; KEGG- neu-NE2159 TPR repeat (228 aa)    
Predicted Functional Partners:
Neut_2106
KEGG- noc-Noc_1958 hypothetical protein (408 aa)
   
      0.881
Neut_2109
KEGG- neu-NE2163 hypothetical protein (83 aa)
   
   
  0.849
Neut_2107
KEGG- neu-NE2161 esterase/lipase/thioesterase family active site (290 aa)
     
      0.846
Neut_2108
KEGG- neu-NE2162 esterase/lipase/thioesterase family active site (284 aa)
     
      0.845
Neut_2103
TIGRFAM- dihydrolipoamide dehydrogenase; PFAM- biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG- neu-NE2157 dihydrolipoamide dehydrogenase (589 aa)
     
      0.684
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate; Belongs to the gamma-glutamyl phosphate reductase family (422 aa)
         
  0.652
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity (640 aa)
   
 
  0.579
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA); In the C-terminal section; belongs to the UPF0434 family (396 aa)
              0.538
dnaK
Chaperone protein DnaK; Acts as a chaperone (647 aa)
     
 
  0.505
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (863 aa)
     
 
  0.463
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (9%) [HD]