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STRINGSTRING
Neut_2109 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2109" - KEGG: neu:NE2163 hypothetical protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2109KEGG- neu-NE2163 hypothetical protein (83 aa)    
Predicted Functional Partners:
Neut_2107
KEGG- neu-NE2161 esterase/lipase/thioesterase family active site (290 aa)
 
   
  0.973
Neut_2108
KEGG- neu-NE2162 esterase/lipase/thioesterase family active site (284 aa)
 
   
  0.965
Neut_2106
KEGG- noc-Noc_1958 hypothetical protein (408 aa)
 
        0.902
Neut_2105
PFAM- Tetratricopeptide TPR_2 repeat protein; KEGG- neu-NE2159 TPR repeat (228 aa)
   
   
  0.849
Neut_1417
PFAM- AMP-dependent synthetase and ligase; KEGG- neu-NE1125 AMP-dependent synthetase and ligase (529 aa)
 
 
 
  0.841
nuoC
NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family (206 aa)
     
 
  0.809
Neut_1110
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (201 aa)
     
      0.809
Neut_1418
PFAM- Orn/DAP/Arg decarboxylase 2; KEGG- neu-NE1126 Orn/DAP/Arg decarboxylases family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family (411 aa)
 
     
  0.795
Neut_0926
TIGRFAM- NADH-quinone oxidoreductase, E subunit; PFAM- NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG- neu-NE1773 respiratory-chain NADH dehydrogenase 24 Kd subunit (162 aa)
     
      0.787
rpmA
PFAM- ribosomal protein L27; KEGG- neu-NE1292 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (85 aa)
   
      0.785
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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