STRINGSTRING
Neut_2117 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2117" - Polysaccharide biosynthesis protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2117Polysaccharide biosynthesis protein (413 aa)    
Predicted Functional Partners:
Neut_2120
Lipopolysaccharide biosynthesis protein (747 aa)
   
 
  0.875
Neut_2115
Group 1 glycosyl transferase (371 aa)
   
   
  0.813
Neut_2113
Group 1 glycosyl transferase (375 aa)
   
   
  0.813
Neut_2112
Group 1 glycosyl transferase (390 aa)
              0.783
Neut_2116
Hypothetical protein (326 aa)
              0.739
Neut_2244
dTDP-4-dehydrorhamnose 3,5-epimerase (181 aa)
 
   
  0.730
Neut_2119
Polysaccharide export protein (405 aa)
     
 
  0.678
Neut_2114
Hypothetical protein (334 aa)
              0.651
Neut_0185
Sugar transferase (186 aa)
 
   
  0.640
Neut_0618
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (483 aa)
   
   
  0.576
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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