• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_2117 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2117" - PFAM: polysaccharide biosynthesis protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2117PFAM- polysaccharide biosynthesis protein; KEGG- cps-CPS_0582 polysaccharide biosynthesis protein (413 aa)    
Predicted Functional Partners:
Neut_2112
PFAM- glycosyl transferase, group 1; KEGG- neu-NE2266 glycosyl transferase group 1 (390 aa)
 
   
  0.738
Neut_2120
PFAM- lipopolysaccharide biosynthesis; KEGG- neu-NE2280 chain length determinant protein (747 aa)
 
   
  0.724
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG- neu-NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM- mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM- mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein (483 aa)
   
   
  0.716
Neut_2115
PFAM- glycosyl transferase, group 1; KEGG- neu-NE2269 glycosyl transferase group 1 (371 aa)
   
   
  0.668
Neut_2244
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (181 aa)
   
   
  0.666
Neut_2116
KEGG- neu-NE2270 hypothetical protein (326 aa)
              0.660
Neut_2113
PFAM- glycosyl transferase, group 1; KEGG- neu-NE2267 glycosyl transferase group 1 (375 aa)
   
   
  0.648
Neut_2114
KEGG- neu-NE2268 hypothetical protein (334 aa)
              0.640
Neut_2118
PFAM- low molecular weight phosphotyrosine protein phosphatase; KEGG- neu-NE2278 low molecular weight phosphotyrosine protein phosphatase (129 aa)
 
     
  0.592
Neut_2119
PFAM- polysaccharide export protein; KEGG- neu-NE2279 polysaccharide export protein (405 aa)
 
 
 
  0.580
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]