STRINGSTRING
Neut_2132 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2132" - Patatin in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2132Patatin (387 aa)    
Predicted Functional Partners:
Neut_2131
Integral membrane protein TerC (241 aa)
              0.862
Neut_2130
UspA domain-containing protein (141 aa)
   
        0.593
Neut_1303
Hypothetical protein (386 aa)
   
          0.434
Neut_2129
cyclic-AMP phosphodiesterase (254 aa)
              0.429
Neut_1149
Putative transmembrane protein (798 aa)
   
          0.427
Neut_0779
Fatty acid desaturase (395 aa)
   
        0.417
Neut_2128
Putative GAF sensor protein (793 aa)
              0.412
Neut_1676
Hypothetical protein (75 aa)
   
          0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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