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rlmN protein (Nitrosomonas eutropha) - STRING interaction network
"rlmN" - Dual-specificity RNA methyltransferase RlmN in Nitrosomonas eutropha
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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rlmNDual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family (379 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
     
 
    0.901
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (468 aa)
 
      0.817
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (141 aa)
   
        0.817
Neut_2170
KEGG- neu-NE0146 TPR repeat; TIGRFAM- type IV pilus biogenesis/stability protein PilW; PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein (263 aa)
   
        0.790
Neut_2169
KEGG- neu-NE0147 hypothetical protein (358 aa)
   
        0.790
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (409 aa)
   
      0.747
Neut_2368
PFAM- band 7 protein; KEGG- neu-NE2467 band 7 protein (259 aa)
            0.737
hisS
Histidine--tRNA ligase; KEGG- neu-NE0150 histidine-tRNA synthetase protein; TIGRFAM- histidyl-tRNA synthetase; PFAM- tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein (421 aa)
   
        0.734
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (414 aa)
   
        0.732
Neut_0310
Oxygen-independent coproporphyrinogen-III oxidase-like protein; Involved in the biosynthesis of porphyrin-containing compound (411 aa)
   
   
  0.717
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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