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Neut_2188 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2188" - TIGRFAM: arginine decarboxylase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2188TIGRFAM- arginine decarboxylase; PFAM- Orn/DAP/Arg decarboxylase 2; KEGG- ade-Adeh_1896 arginine decarboxylase (652 aa)    
Predicted Functional Partners:
Neut_2187
Agmatinase; TIGRFAM- putative agmatinase; PFAM- Arginase/agmatinase/formiminoglutamase; KEGG- ppu-PP2196 agmatinase; Belongs to the arginase family (314 aa)
   
  0.991
Neut_1437
Agmatinase; TIGRFAM- putative agmatinase; PFAM- Arginase/agmatinase/formiminoglutamase; KEGG- neu-NE1147 agmatinase; Belongs to the arginase family (322 aa)
   
  0.952
argH
TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase; KEGG- neu-NE1854 argininosuccinate lyase (461 aa)
     
 
  0.830
Neut_1995
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family (709 aa)
           
  0.549
rpmH
PFAM- ribosomal protein L34; KEGG- neu-NE0390 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family (44 aa)
       
      0.445
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
       
      0.445
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
              0.414
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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