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Neut_2188 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2188" - Arginine decarboxylase in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2188Arginine decarboxylase (652 aa)    
Predicted Functional Partners:
Neut_2187
Putative agmatinase (314 aa)
 
  0.996
Neut_1437
Agmatinase (322 aa)
   
  0.976
rpmH
50S ribosomal protein L34 (44 aa)
       
      0.815
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
       
      0.815
argH
Argininosuccinate lyase (461 aa)
         
  0.806
Neut_0426
Serine O-acetyltransferase (308 aa)
 
        0.560
Neut_1418
Orn/DAP/Arg decarboxylase 2 (411 aa)
         
  0.511
Neut_2464
Spermidine synthase (319 aa)
         
  0.497
Neut_1742
Diaminopimelate decarboxylase (400 aa)
         
0.460
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (417 aa)
         
0.460
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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