Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
CRISPR-associated Csm1 family protein (872 aa)
Predicted Functional Partners:
CRISPR-associated RAMP Csm3 family protein (238 aa)
CRISPR-associated RAMP Csm5 family protein (533 aa)
Hypothetical protein (322 aa)
Hypothetical protein (318 aa)
CRISPR-associated NE0113 family protein (376 aa)
CRISPR-associated TM1812 family protein (389 aa)
CRISPR-associated Cas1 family protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (328 aa)
Putative sulfonate binding protein precursor (358 aa)
CRISPR-associated Csm2 family protein (123 aa)
Hypothetical protein (373 aa)
Your Current Organism:
NCBI taxonomy Id: 335283 Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91