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Neut_2223 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2223" - CRISPR-associated TM1812 family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2223CRISPR-associated TM1812 family protein (389 aa)    
Predicted Functional Partners:
Neut_2221
Hypothetical protein (318 aa)
 
          0.967
Neut_2219
Hypothetical protein (322 aa)
 
          0.926
Neut_2218
CRISPR-associated RAMP Csm3 family protein (238 aa)
 
          0.922
Neut_2220
CRISPR-associated RAMP Csm5 family protein (533 aa)
 
          0.917
Neut_2216
CRISPR-associated Csm1 family protein (872 aa)
 
          0.884
Neut_2222
Putative CRISPR-associated VVA1548 family protein (98 aa)
              0.862
Neut_2225
CRISPR-associated NE0113 family protein (376 aa)
 
          0.857
Neut_2246
Hypothetical protein (357 aa)
   
          0.765
Neut_0906
Hypothetical protein (373 aa)
   
          0.757
Neut_0905
Hypothetical protein (315 aa)
   
          0.750
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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