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Neut_2225 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2225" - CRISPR-associated NE0113 family protein in Nitrosomonas eutropha
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2225CRISPR-associated NE0113 family protein (376 aa)    
Predicted Functional Partners:
Neut_2221
Hypothetical protein (318 aa)
 
          0.910
Neut_2216
CRISPR-associated Csm1 family protein (872 aa)
 
          0.892
Neut_2223
CRISPR-associated TM1812 family protein (389 aa)
 
          0.857
Neut_2219
Hypothetical protein (322 aa)
 
          0.855
Neut_2220
CRISPR-associated RAMP Csm5 family protein (533 aa)
 
          0.854
Neut_2218
CRISPR-associated RAMP Csm3 family protein (238 aa)
 
          0.828
Neut_2229
CRISPR-associated Cas1 family protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (328 aa)
 
          0.742
Neut_0905
Hypothetical protein (315 aa)
   
          0.680
Neut_0906
Hypothetical protein (373 aa)
   
          0.665
Neut_2246
Hypothetical protein (357 aa)
   
          0.640
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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