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dapE protein (Nitrosomonas eutropha) - STRING interaction network
"dapE" - Succinyl-diaminopimelate desuccinylase in Nitrosomonas eutropha
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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dapESuccinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily (378 aa)    
Predicted Functional Partners:
Neut_0228
Succinyldiaminopimelate aminotransferase apoenzyme; PFAM- aminotransferase, class I and II; KEGG- neu-NE2463 hypothetical protein (401 aa)
 
   
  0.972
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (278 aa)
 
   
  0.963
argD
TIGRFAM- acetylornithine and succinylornithine aminotransferases; PFAM- aminotransferase class-III; KEGG- neu-NE1439 acetylornithine aminotransferase (393 aa)
   
 
  0.956
argA
TIGRFAM- amino-acid N-acetyltransferase; PFAM- GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG- neu-NE0778 GCN5-related N-acetyltransferase-aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily (444 aa)
   
   
  0.779
dapD
KEGG- neu-NE2462 bacterial transferase hexapeptide repeat; TIGRFAM- 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM- transferase hexapeptide repeat containing protein; Belongs to the transferase hexapeptide repeat family (273 aa)
 
   
  0.760
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
   
 
  0.698
argG
PFAM- argininosuccinate synthase; KEGG- neu-NE1437 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (404 aa)
   
 
  0.698
Neut_2236
PFAM- protein of unknown function DUF140; KEGG- neu-NE0106 possible ABC transport permease (381 aa)
   
        0.692
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family (268 aa)
 
 
  0.691
Neut_2235
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0107 ATPase component uncharacterized ABC-type transport system (260 aa)
              0.688
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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