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STRINGSTRING
Neut_0680 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0680" - PFAM: phage integrase family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0680PFAM- phage integrase family protein; KEGG- sfx-S2723 putative integrase; Belongs to the ’phage’ integrase family (400 aa)    
Predicted Functional Partners:
Neut_0679
Phage transcriptional regulator, AlpA; PFAM- Prophage CP4-57 regulatory; KEGG- sfx-S2722 hypothetical bacteriophage protein (73 aa)
 
          0.887
Neut_0678
Plasmid and phage replicative helicase; KEGG- sfx-S2721 putative DNA helicase (275 aa)
 
          0.810
ABI58951.1
PFAM- Prophage CP4-57 regulatory; KEGG- sfx-S2722 hypothetical bacteriophage protein (73 aa)
   
          0.778
ABI58950.1
KEGG- sfx-S2721 putative DNA helicase (275 aa)
   
          0.627
Neut_0677
Plasmid and phage iteron-binding protein; PFAM- replication C family protein; KEGG- sfx-S2720 putative replication protein C (293 aa)
              0.512
Neut_0675
KEGG- sfx-S2718 putative mating pair formation protein (259 aa)
   
          0.469
ABI58947.1
KEGG- sfx-S2718 putative mating pair formation protein (259 aa)
   
          0.469
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (519 aa)
   
        0.451
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (487 aa)
              0.421
Neut_0673
PFAM- TrbL/VirB6 plasmid conjugal transfer protein; KEGG- sfx-S2716 putative mating pair formation protein (475 aa)
   
          0.418
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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