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Neut_2289 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2289" - PFAM: peptidase M48, Ste24p in Nitrosomonas eutropha
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2289PFAM- peptidase M48, Ste24p; KEGG- neu-NE0076 peptidase family M48 (422 aa)    
Predicted Functional Partners:
rsgA
Small ribosomal subunit biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit (309 aa)
         
  0.889
Neut_2288
Putative pterin-4-alpha-carbinolamine dehydratase; PFAM- transcriptional coactivator/pterin dehydratase; KEGG- neu-NE0077 pterin 4 alpha carbinolamine dehydratase (113 aa)
              0.855
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
   
 
  0.756
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (181 aa)
 
        0.735
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.548
Neut_2291
KEGG- neu-NE0074 putative alpha-glucan phosphorylase, putative; TIGRFAM- alpha-glucan phosphorylases; PFAM- glycosyl transferase, family 35 (851 aa)
              0.490
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
         
  0.440
atpD1
ATP synthase subunit beta 1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family (460 aa)
 
            0.438
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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