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STRINGSTRING
Neut_2300 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2300" - PFAM: protein of unknown function DUF1239 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2300PFAM- protein of unknown function DUF1239; KEGG- neu-NE0065 hypothetical protein (193 aa)    
Predicted Functional Partners:
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane (183 aa)
 
 
  0.954
Neut_2302
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0063 ATPase component ABC-type (unclassified) transport system (240 aa)
   
 
  0.887
Neut_1165
Uncharacterized protein; KEGG- neu-NE1868 conserved hypothetical protein (210 aa)
   
          0.767
Neut_2279
KEGG- neu-NE0086 hypothetical protein (240 aa)
   
        0.732
Neut_0855
PFAM- Sulfate transporter/antisigma-factor antagonist STAS; KEGG- neu-NE2380 STAS domain (104 aa)
 
        0.693
Neut_0548
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins (383 aa)
   
          0.685
Neut_2303
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
   
   
  0.683
Neut_2438
PFAM- FlgN family protein; KEGG- neu-NE2477 putative flagella synthesis protein FlgN (154 aa)
   
          0.646
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
   
     
  0.645
Neut_0751
KEGG- neu-NE2077 hypothetical protein (341 aa)
   
          0.631
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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