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Neut_2302 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2302" - ABC transporter-like protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2302ABC transporter-like protein (240 aa)    
Predicted Functional Partners:
Neut_1103
YjgP/YjgQ family permease (352 aa)
 
 
  0.990
Neut_1102
YjgP/YjgQ family permease (357 aa)
 
  0.987
Neut_2303
RNA polymerase sigma 54 subunit RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
 
   
  0.895
lptA
OstA family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane (183 aa)
 
   
  0.881
Neut_0435
3-deoxy-manno-octulosonate cytidylyltransferase (252 aa)
 
        0.805
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (396 aa)
 
          0.774
Neut_2304
Sigma 54 modulation protein/ribosomal protein S30EA (111 aa)
         
  0.712
Neut_0286
MotA/TolQ/ExbB proton channel (234 aa)
   
          0.679
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (615 aa)
 
     
  0.634
bamA
Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (758 aa)
 
   
  0.606
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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