• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_2314 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2314" - PFAM: copper resistance protein CopC in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2314PFAM- copper resistance protein CopC; KEGG- neu-NE2059 putative similar to copper export proteins (143 aa)    
Predicted Functional Partners:
Neut_2313
PFAM- copper resistance D domain protein; KEGG- neu-NE2058 cytochrome c, class IC-cytochrome c, class I (714 aa)
 
   
  0.966
Neut_2315
KEGG- neu-NE2060 hypothetical protein (195 aa)
              0.581
Neut_2312
KEGG- neu-NE2057 hypothetical protein (185 aa)
              0.558
Neut_2076
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit B; KEGG- neu-NE2062 ammonia monooxygenase, subunit B (421 aa)
 
          0.528
Neut_0312
PFAM- copper resistance B precursor; KEGG- neu-NE0280 possible copper resistance protein B precursor (271 aa)
         
  0.520
Neut_2077
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit A; KEGG- neu-NE2063 ammonia monooxygenase, subunit A (276 aa)
 
          0.518
Neut_2078
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit C; KEGG- neu-NE0945 ammonia monooxygenase subunit C2 (271 aa)
 
          0.447
Neut_2316
Putative (U92432) ORF4 (Nitrosospira sp, NpAV); KEGG- neu-NE2061 possible (U92432) ORF4 [Nitrosospira sp. NpAV] (190 aa)
              0.445
Neut_2526
PFAM- protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- neu-NE2567 hypothetical protein (560 aa)
       
      0.442
Neut_1175
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG- neu-NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase (507 aa)
       
      0.442
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (15%) [HD]