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STRINGSTRING
ABI60566.1 protein (Nitrosomonas eutropha) - STRING interaction network
"ABI60566.1" - PFAM: protein of unknown function DUF1328 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI60566.1PFAM- protein of unknown function DUF1328; KEGG- noc-Noc_0484 protein of unknown function DUF1328 (55 aa)    
Predicted Functional Partners:
ABI60565.1
PFAM- CsbD family protein; KEGG- hch-HCH_05492 hypothetical protein (65 aa)
 
        0.719
Neut_1345
KEGG- neu-NE0824 hypothetical protein (182 aa)
   
          0.545
Neut_2349
Uncharacterized protein; KEGG- ath-At5g44310_1 late embryogenesis abundant (LEA) domain-containing protein (154 aa)
              0.539
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
   
          0.521
Neut_1833
KEGG- neu-NE1747 putative type 4 fimbrial biogenesis protein PilY1 (1143 aa)
   
          0.482
Neut_1378
KEGG- neu-NE0900 hypothetical protein (144 aa)
   
          0.481
Neut_0132
KEGG- neu-NE0011 cytochrome P460 precursor (198 aa)
   
          0.425
Neut_0727
KEGG- ecs-ECs5258 hypothetical protein (88 aa)
   
          0.419
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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