STRINGSTRING
Neut_2387 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2387" - Transport-associated in Nitrosomonas eutropha
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2387Transport-associated (171 aa)    
Predicted Functional Partners:
Neut_2388
D-lactate dehydrogenase (456 aa)
              0.746
Neut_2177
Generic methyl-transferase (235 aa)
   
 
      0.654
Neut_0732
NlpB/DapX family lipoprotein (386 aa)
   
        0.562
bamE
SmpA/OmlA domain-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (160 aa)
   
          0.506
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (418 aa)
   
 
      0.497
Neut_1303
Hypothetical protein (386 aa)
   
          0.480
rsmI
Hypothetical protein; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (298 aa)
         
  0.471
Neut_2147
Hypothetical protein (186 aa)
   
          0.471
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
   
        0.445
Neut_2298
Endonuclease/exonuclease/phosphatase (253 aa)
   
        0.443
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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