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STRINGSTRING
Neut_2439 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2439" - PFAM: Anti-sigma-28 factor, FlgM family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2439PFAM- Anti-sigma-28 factor, FlgM family protein; KEGG- neu-NE2478 negative regulator of flagellin synthesis FlgM (100 aa)    
Predicted Functional Partners:
Neut_2438
PFAM- FlgN family protein; KEGG- neu-NE2477 putative flagella synthesis protein FlgN (154 aa)
   
   
  0.989
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (236 aa)
   
  0.987
Neut_0334
Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly (231 aa)
   
   
  0.878
flgK
TIGRFAM- flagellar hook-associated protein FlgK; PFAM- flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG- neu-NE0311 flagella basal body rod protein (467 aa)
   
   
  0.868
Neut_1162
CheA signal transduction histidine kinases; PFAM- response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG- neu-NE1250 two-component hybrid sensor and regulator (1716 aa)
   
 
  0.848
Neut_0949
PFAM- flagellar protein FliS; KEGG- neu-NE1596 flagellar protein FliS (156 aa)
   
   
  0.847
Neut_0337
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein (223 aa)
   
   
  0.847
Neut_0335
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (136 aa)
   
   
  0.824
Neut_0338
PFAM- flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG- neu-NE0305 flagella basal body rod protein (419 aa)
   
 
  0.821
Neut_0336
TIGRFAM- flagellar basal-body rod protein FlgC; PFAM- flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG- neu-NE0303 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family (134 aa)
   
   
  0.818
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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