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Neut_2448 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2448" - Type I restriction-modification system in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2448Type I restriction-modification system (92 aa)    
Predicted Functional Partners:
Neut_0540
Restriction modification system DNA specificity subunit (422 aa)
   
 
  0.933
Neut_0537
Type I site-specific deoxyribonuclease, HsdR family protein (1072 aa)
   
   
  0.777
Neut_0541
N-6 DNA methylase (542 aa)
            0.723
Neut_2454
Hypothetical protein (78 aa)
 
        0.671
Neut_0778
DNA polymerase I (906 aa)
         
  0.626
Neut_1757
Hypothetical protein (145 aa)
              0.506
Neut_2415
Filamentation induced by cAMP protein fic (369 aa)
     
      0.494
fliA
RNA polymerase subunit sigma 28; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (236 aa)
              0.492
Neut_2446
Putative MinD-related protein (297 aa)
              0.488
Neut_2445
Flagellar biosynthesis regulator FlhF (423 aa)
              0.488
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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