• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_2487 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2487" - PFAM: Ankyrin in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2487PFAM- Ankyrin; KEGG- neu-NE1049 ankyrin-repeat (324 aa)    
Predicted Functional Partners:
Neut_2486
KEGG- neu-NE1048 succinate dehydrogenase/fumarate reductase, flavoprotein subunits; TIGRFAM- succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM- fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (587 aa)
   
   
  0.622
Neut_2485
KEGG- neu-NE1047 succinate dehydrogenase, cytochrome b subunit (117 aa)
              0.612
Neut_2484
PFAM- succinate dehydrogenase, cytochrome b subunit; KEGG- neu-NE1046 succinate dehydrogenase, cytochrome b subunit (130 aa)
              0.612
dnaK
Chaperone protein DnaK; Acts as a chaperone (647 aa)
 
 
 
  0.582
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (499 aa)
   
 
  0.494
Neut_1809
PFAM- histone deacetylase superfamily; KEGG- rso-RSc0919 hypothetical protein (306 aa)
     
 
  0.469
Neut_2488
DNA translocase FtsK; PFAM- cell divisionFtsK/SpoIIIE; SMART- AAA ATPase; KEGG- neu-NE1051 FtsK/SpoIIIE family-AAA ATPase superfamily (768 aa)
              0.462
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (215 aa)
       
 
  0.459
apaH
Bis(5’-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (266 aa)
     
      0.453
Neut_0223
KEGG- neu-NE0053 D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM- peptidase S13, D-Ala-D-Ala carboxypeptidase C (475 aa)
       
 
  0.439
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]