STRINGSTRING
Neut_2530 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2530" - Beta-lactamase domain-containing protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2530Beta-lactamase domain-containing protein (287 aa)    
Predicted Functional Partners:
Neut_2526
Hypothetical protein (560 aa)
 
 
  0.989
Neut_1175
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (507 aa)
   
 
  0.920
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
     
      0.826
Neut_2529
Hypothetical protein (142 aa)
 
     
  0.793
Neut_2528
Hypothetical protein (155 aa)
 
        0.761
Neut_2525
Hypothetical protein (277 aa)
 
          0.710
Neut_2527
Transcriptional regulator, HxlR family protein (141 aa)
              0.708
rpoH
RNA polymerase factor sigma-32 (280 aa)
   
      0.511
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (749 aa)
   
      0.511
Neut_2523
ATP-dependent DNA helicase RecQ (539 aa)
   
        0.439
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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