Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABE73872.1 | ABE73873.1 | Pcryo_0088 | Pcryo_0089 | DNA-N1-methyladenine dioxygenase. | Alpha/beta hydrolase fold protein. | 0.773 |
ABE73872.1 | ABE73874.1 | Pcryo_0088 | Pcryo_0090 | DNA-N1-methyladenine dioxygenase. | ABC transporter related protein. | 0.626 |
ABE73872.1 | ABE75032.1 | Pcryo_0088 | Pcryo_1251 | DNA-N1-methyladenine dioxygenase. | Methylthioadenosine phosphorylase. | 0.686 |
ABE73872.1 | ABE75085.1 | Pcryo_0088 | Pcryo_1304 | DNA-N1-methyladenine dioxygenase. | ABC transporter related protein. | 0.457 |
ABE73872.1 | ABE75259.1 | Pcryo_0088 | Pcryo_1480 | DNA-N1-methyladenine dioxygenase. | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.403 |
ABE73872.1 | ABE75418.1 | Pcryo_0088 | Pcryo_1641 | DNA-N1-methyladenine dioxygenase. | Conserved hypothetical protein. | 0.413 |
ABE73873.1 | ABE73872.1 | Pcryo_0089 | Pcryo_0088 | Alpha/beta hydrolase fold protein. | DNA-N1-methyladenine dioxygenase. | 0.773 |
ABE73873.1 | ABE73874.1 | Pcryo_0089 | Pcryo_0090 | Alpha/beta hydrolase fold protein. | ABC transporter related protein. | 0.649 |
ABE73874.1 | ABE73872.1 | Pcryo_0090 | Pcryo_0088 | ABC transporter related protein. | DNA-N1-methyladenine dioxygenase. | 0.626 |
ABE73874.1 | ABE73873.1 | Pcryo_0090 | Pcryo_0089 | ABC transporter related protein. | Alpha/beta hydrolase fold protein. | 0.649 |
ABE75032.1 | ABE73872.1 | Pcryo_1251 | Pcryo_0088 | Methylthioadenosine phosphorylase. | DNA-N1-methyladenine dioxygenase. | 0.686 |
ABE75085.1 | ABE73872.1 | Pcryo_1304 | Pcryo_0088 | ABC transporter related protein. | DNA-N1-methyladenine dioxygenase. | 0.457 |
ABE75259.1 | ABE73872.1 | Pcryo_1480 | Pcryo_0088 | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | DNA-N1-methyladenine dioxygenase. | 0.403 |
ABE75418.1 | ABE73872.1 | Pcryo_1641 | Pcryo_0088 | Conserved hypothetical protein. | DNA-N1-methyladenine dioxygenase. | 0.413 |